PEGASUS/build_pegasus.sh 0000755 0000000 0000000 00000000041 11443145611 014043 0 ustar root root ant -f build_pegasus.xml makejar
PEGASUS/build_pegasus.xml 0000644 0000000 0000000 00000002406 11443145611 014235 0 ustar root root
PEGASUS: A Peta-Scale Graph Mining System
PEGASUS/catepillar_star.edge 0000644 0000000 0000000 00000000102 11443145611 014653 0 ustar root root 0 1
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PEGASUS/catepillar_star_rwr.query 0000644 0000000 0000000 00000000012 11443145611 016006 0 ustar root root 6 1
3 2.0
PEGASUS/classes/ 0000755 0000000 0000000 00000000000 11443145616 012325 5 ustar root root PEGASUS/classes/pegasus/ 0000755 0000000 0000000 00000000000 11443145620 013767 5 ustar root root PEGASUS/classes/pegasus/PegasusUtils$MapHistogram.class 0000644 0000000 0000000 00000006731 11443145620 022035 0 ustar root root 2
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y { | } number_nodes J nreducers I ()V Code LineNumberTable LocalVariableTable this MapHistogram InnerClasses #Lpegasus/PegasusUtils$MapHistogram; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V long_str Ljava/lang/String; key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text tabpos first_column_key out_key LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable { x s ~
Exceptions Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PegasusUtils.java & ' " # $ % java/lang/StringBuilder )MapHistogram configure(): number_nodes = , nreducers= org/apache/hadoop/io/IntWritable & org/apache/hadoop/io/Text & ~ !org/apache/hadoop/io/LongWritable 3 4 !pegasus/PegasusUtils$MapHistogram &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Long parseLong (Ljava/lang/String;)J getNumReduceTasks ()I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (J)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V indexOf (Ljava/lang/String;)I substring (II)Ljava/lang/String; length (I)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PegasusUtils ! ! " # $ % & ' ( A * * * ) * + . / 0 ( ~ >*+ *+ Y
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z , PEGASUS/classes/pegasus/DegDist$RedPass2.class 0000644 0000000 0000000 00000004376 11443145620 017763 0 ustar root root 2 N
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StackMapTable
Exceptions A Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile DegDist.java
B C D E F org/apache/hadoop/io/IntWritable G H I J K L M pegasus/DegDist$RedPass2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/io/IOException java/util/Iterator hasNext ()Z next ()Ljava/lang/Object; get ()I (I)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/DegDist !
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from_node_int "Lorg/apache/hadoop/io/IntWritable; isYpath Z isXpath a D ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses Lpegasus/Saxpy$MapStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; y_path Ljava/lang/String; x_path
input_file
StackMapTable map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text tabpos I out_key out_val LocalVariableTypeTable sLorg/apache/hadoop/mapred/OutputCollector;
Exceptions Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile
Saxpy.java 3 4 org/apache/hadoop/io/IntWritable , - . / 0 / 1 2 map.input.file java/lang/StringBuilder "Saxpy.MapStage1: map.input.file =
, isYpath=
, isXpath= , a= 3 #org/apache/hadoop/io/DoubleWritable 3 !org/apache/hadoop/io/LongWritable org/apache/hadoop/io/Text F G pegasus/Saxpy$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Double parseDouble (Ljava/lang/String;)D contains (Ljava/lang/CharSequence;)Z java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (Z)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V indexOf (Ljava/lang/String;)I substring (II)Ljava/lang/String; java/lang/Integer parseInt charAt (I)C (I)Ljava/lang/String; (I)V (D)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V
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) 9 PEGASUS/classes/pegasus/RWRBlock$RedStage2.class 0000644 0000000 0000000 00000011077 11443145620 020216 0 ustar root root 2
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- block_width I mixing_c D number_nodes query_nodeid query_blockrow query_blockind ()V Code LineNumberTable LocalVariableTable this RedStage2 InnerClasses Lpegasus/RWRBlock$RedStage2; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v_elem Lpegasus/VectorElem; cur_str Ljava/lang/String;
cur_vector Ljava/util/ArrayList; vector_iter Ljava/util/Iterator; key "Lorg/apache/hadoop/io/IntWritable; values output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; self_vector i out_vals [D out_str LocalVariableTypeTable (Lpegasus/VectorElem; ?Ljava/util/ArrayList;>; >Ljava/util/Iterator;>; 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable Y
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile
RWRBlock.java 8 9 2 3 4 1 5 1 6 1 7 1 0 1 java/lang/StringBuilder RedStage2 : block_width= , query_nodeid= org/apache/hadoop/io/Text java/lang/Double pegasus/VectorElem l 8 org/apache/hadoop/io/IntWritable E F pegasus/RWRBlock$RedStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/ArrayList java/lang/String java/util/Iterator java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I parseDouble (Ljava/lang/String;)D java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; charAt (I)C substring (I)Ljava/lang/String; pegasus/GIMV parseVectorVal :(Ljava/lang/String;Ljava/lang/Class;)Ljava/util/ArrayList; iterator ()Ljava/util/Iterator; row S val doubleValue ()D length ()I (D)Ljava/lang/StringBuilder; (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/RWRBlock ! - . / 0 1 2 3 4 1 5 1 6 1 7 1 8 9 : \ * * * * * * ; < = @ A B : w*+ *+
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- > PEGASUS/classes/pegasus/ResultInfo.class 0000644 0000000 0000000 00000000466 11443145617 017124 0 ustar root root 2
changed I unchanged ()V Code LineNumberTable LocalVariableTable this Lpegasus/ResultInfo;
SourceFile ConCmpt.java pegasus/ResultInfo java/lang/Object / *
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PEGASUS/classes/pegasus/PagerankBlock$MapStage25.class 0000644 0000000 0000000 00000006617 11443145620 021370 0 ustar root root 2
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MapStage25 InnerClasses "Lpegasus/PagerankBlock$MapStage25; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V elem_row pagerank D key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line [Ljava/lang/String; tokens i block_id LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable x u o { | =
Exceptions } Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PagerankBlock.java " # ~ ! java/lang/StringBuilder MapStage25: block_width = org/apache/hadoop/io/IntWritable " org/apache/hadoop/io/Text v " { !org/apache/hadoop/io/LongWritable / 0 pegasus/PagerankBlock$MapStage25 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V java/lang/String split '(Ljava/lang/String;)[Ljava/lang/String; substring (I)Ljava/lang/String; java/lang/Double parseDouble (Ljava/lang/String;)D (I)V (D)Ljava/lang/StringBuilder; collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PagerankBlock ! ! " # $ / * % & ' * + , $ f **+ Y
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w ( PEGASUS/classes/pegasus/HadiBlock$RedStage3.class 0000644 0000000 0000000 00000005655 11443145617 020425 0 ustar root root 2 z
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output_val Lorg/apache/hadoop/io/Text; ()V Code LineNumberTable LocalVariableTable this RedStage3 InnerClasses Lpegasus/HadiBlock$RedStage3; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V line [Ljava/lang/String; key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; nh_sum D
converged_sum I changed_sum LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions ` Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile HadiBlock.java a b c d e org/apache/hadoop/io/Text f g h i j k l m n o p java/lang/StringBuilder f q r s f t u v w x org/apache/hadoop/io/IntWritable # $ y pegasus/HadiBlock$RedStage3 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/io/IOException java/util/Iterator hasNext ()Z next ()Ljava/lang/Object; toString ()Ljava/lang/String; java/lang/String split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Double parseDouble (Ljava/lang/String;)D java/lang/Integer parseInt (Ljava/lang/String;)I (D)Ljava/lang/String; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/String; (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/HadiBlock ! / * 9 " # $ b
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\ PEGASUS/classes/pegasus/HadiBlock$CombinerStage2.class 0000644 0000000 0000000 00000011245 11443145617 021440 0 ustar root root 2
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cur_radius block_width ()V Code LineNumberTable LocalVariableTable this CombinerStage2 InnerClasses "Lpegasus/HadiBlock$CombinerStage2; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V j v_elem Lpegasus/VectorElem; cur_str Ljava/lang/String;
cur_vector Ljava/util/ArrayList; vector_iter Ljava/util/Iterator;
new_vector key "Lorg/apache/hadoop/io/IntWritable; values output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; i out_vals [[J bs_count LocalVariableTypeTable (Lpegasus/VectorElem; ?Ljava/util/ArrayList;>; >Ljava/util/Iterator;>; 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile HadiBlock.java 3 4 . / 0 / 1 / 2 / java/lang/StringBuilder CombinerStage2: block_width = , nreplication = , encode_bitmask = , cur_radius = org/apache/hadoop/io/Text 3 pegasus/VectorElem k java/lang/String o org/apache/hadoop/io/IntWritable @ A pegasus/HadiBlock$CombinerStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/util/ArrayList java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; pegasus/GIMV parseHADIVector )(Ljava/lang/String;)Ljava/util/ArrayList; charAt (I)C collect '(Ljava/lang/Object;Ljava/lang/Object;)V iterator ()Ljava/util/Iterator; row S val updateHADIBitString ([JLjava/lang/String;II)[J makeHADICombinerBitString ([[JIIII)Ljava/util/ArrayList; formatVectorElemOutput D(Ljava/lang/String;Ljava/util/ArrayList;)Lorg/apache/hadoop/io/Text; pegasus/HadiBlock ! + , - . / 0 / 1 / 2 / 3 4 5 J * * * * 6 7 8 ; < = 5 u*+ *+ *+
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+ 9 PEGASUS/classes/pegasus/PagerankNaive$RedStage3.class 0000644 0000000 0000000 00000007150 11443145620 021302 0 ustar root root 2
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w y z { number_nodes I mixing_c D random_coeff ()V Code LineNumberTable LocalVariableTable this RedStage3 InnerClasses !Lpegasus/PagerankNaive$RedStage3; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V cur_value key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; min_value max_value
min_or_max LocalVariableTypeTable ;Ljava/util/Iterator; sLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable y v | } ~
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile PagerankNaive.java & ' ! " # $ % $ java/lang/StringBuilder RedStage2: number_nodes =
, mixing_c = , random_coeff = | #org/apache/hadoop/io/DoubleWritable & } org/apache/hadoop/io/IntWritable 3 4 pegasus/PagerankNaive$RedStage3 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/Double parseDouble (Ljava/lang/String;)D java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V ()I hasNext ()Z next ()Ljava/lang/Object; ()D (D)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PagerankNaive ! ! " # $ % $ & ' ( J * * * * ) * + . / 0 ( _*+ *+ ** g* o
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x , PEGASUS/classes/pegasus/DegDist$MapPass1.class 0000644 0000000 0000000 00000006743 11443145620 017765 0 ustar root root 2
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u v w x deg_type I ()V Code LineNumberTable LocalVariableTable this MapPass1 InnerClasses Lpegasus/DegDist$MapPass1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key_node_int "Lorg/apache/hadoop/io/IntWritable;
from_node_int to_node_int key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; line [Ljava/lang/String; one_int LocalVariableTypeTable pLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable y A j
Exceptions z Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile DegDist.java # $ ! " { | } ~ java/lang/StringBuilder *MapPass1 : configure is called. degtype = # y org/apache/hadoop/io/IntWritable # " " " !org/apache/hadoop/io/LongWritable org/apache/hadoop/io/Text 0 1 pegasus/DegDist$MapPass1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; (I)V pegasus/DegDist OutDeg set (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V InDeg InOutDeg ! ! " # $ % 8
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l ) PEGASUS/classes/pegasus/PegasusUtils$RedSumDoubleTextKey.class 0000644 0000000 0000000 00000004462 11443145620 023311 0 ustar root root 2 P
4 5 6 5 7 8
9
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> @ A B ()V Code LineNumberTable LocalVariableTable this RedSumDoubleTextKey InnerClasses *Lpegasus/PegasusUtils$RedSumDoubleTextKey; reduce (Lorg/apache/hadoop/io/Text;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V cur_val D key Lorg/apache/hadoop/io/Text; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; sum LocalVariableTypeTable ;Ljava/util/Iterator; lLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions C Signature (Lorg/apache/hadoop/io/Text;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile PegasusUtils.java
D E F G H #org/apache/hadoop/io/DoubleWritable I J
K L M N org/apache/hadoop/io/Text O (pegasus/PegasusUtils$RedSumDoubleTextKey &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/io/IOException java/util/Iterator hasNext ()Z next ()Ljava/lang/Object; get ()D (D)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PegasusUtils !
/ * : 59, , 9c9-+ Y > @ A B !C $E 4F H 5 5 5 5 5 ! 2 " # 5 $ 5 % & ' ( ) *A + _
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? PEGASUS/classes/pegasus/RWRNaive$RedStage4.class 0000644 0000000 0000000 00000004403 11443145620 020223 0 ustar root root 2 N
3 4 5 4 6 7
8
9 : ;
< > ? @ ()V Code LineNumberTable LocalVariableTable this RedStage4 InnerClasses Lpegasus/RWRNaive$RedStage4; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V cur_value I key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; sum LocalVariableTypeTable 8Ljava/util/Iterator; pLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions A Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile
RWRNaive.java
B C D E F org/apache/hadoop/io/IntWritable G H I J K L M pegasus/RWRNaive$RedStage4 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/io/IOException java/util/Iterator hasNext ()Z next ()Ljava/lang/Object; get ()I (I)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/RWRNaive !
/ * 56, , 6`6-+ Y ! $ 4 H 5 5 5 5 5 2 ! " 5 # 5 $ % & ' ( )A * _
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= PEGASUS/classes/pegasus/ConCmptIVGen$MapStage1.class 0000644 0000000 0000000 00000005142 11443145617 021031 0 ustar root root 2 i
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Q S T U ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses Lpegasus/ConCmptIVGen$MapStage1; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; line [Ljava/lang/String; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable V ,
Exceptions W Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile ConCmptIVGen.java X Y # V Z [ \ ] org/apache/hadoop/io/IntWritable ^ _ ` a org/apache/hadoop/io/Text java/lang/StringBuilder b c d e f g !org/apache/hadoop/io/LongWritable h pegasus/ConCmptIVGen$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String java/io/IOException toString ()Ljava/lang/String;
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)V append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/ConCmptIVGen ! / * ( [, : : - Y2
Y Y 2
2
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- ( 4 7 8 9 8 : & ; ( 2 3 4 < = >
R PEGASUS/classes/pegasus/RWRBlock$MapStage2.class 0000644 0000000 0000000 00000004533 11443145620 020220 0 ustar root root 2 X
6
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D F G H ()V Code LineNumberTable LocalVariableTable this MapStage2 InnerClasses Lpegasus/RWRBlock$MapStage2; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line [Ljava/lang/String; node_key "Lorg/apache/hadoop/io/IntWritable; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
Exceptions I Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile
RWRBlock.java J K L M N org/apache/hadoop/io/IntWritable O P Q R org/apache/hadoop/io/Text S T U V !org/apache/hadoop/io/LongWritable W pegasus/RWRBlock$MapStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/io/IOException toString ()Ljava/lang/String; java/lang/String split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)V (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/RWRBlock !
/ * /, : Y2 :- Y2
. H / / / / / ! " $ # $ % & ' / ( ) * + ,A - b *+ , - 4 . / 0 / 1 2 " ) * + 3 4 5
E PEGASUS/classes/pegasus/PagerankInitVector.class 0000644 0000000 0000000 00000012221 11443145620 020553 0 ustar root root 2
I
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7
7
7
7
7
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7 RedStage1 InnerClasses MapStage1 output_path Lorg/apache/hadoop/fs/Path; initial_prinput_path number_nodes I nreducers ()V Code LineNumberTable LocalVariableTable this Lpegasus/PagerankInitVector; main ([Ljava/lang/String;)V args [Ljava/lang/String; result
Exceptions
printUsage ()I run ([Ljava/lang/String;)I i
StackMapTable gen_initial_pagerank_file (IILorg/apache/hadoop/fs/Path;)V end_node
start_node nmachines initial_input_path gap file_name Ljava/lang/String; file Ljava/io/FileWriter; out Ljava/io/BufferedWriter; fs !Lorg/apache/hadoop/fs/FileSystem; configStage1 $()Lorg/apache/hadoop/mapred/JobConf; conf "Lorg/apache/hadoop/mapred/JobConf;
SourceFile PagerankInitVector.java T U N O org/apache/hadoop/fs/Path pr_input T P O Q R S R $org/apache/hadoop/conf/Configuration pegasus/PagerankInitVector d s =PagerankInitVector <# of nodes> <# of reducers> java/lang/StringBuilder args.length = args[ ] = b c =
-----===[PEGASUS: A Peta-Scale Graph Mining System]===-----
1[PEGASUS] Generating initial PageRank vector for nodes.
h i } ~ 9
[PEGASUS] Initial vector for PageRank generated in HDFS
pagerank.initial_rank.temp java/io/FileWriter java/io/BufferedWriter T # number of nodes in graph = )creating initial pagerank (total nodes = ) U ./ / org/apache/hadoop/mapred/JobConf T PagerankInitVector_Stage1 $pegasus/PagerankInitVector$MapStage1 $pegasus/PagerankInitVector$RedStage1 org/apache/hadoop/io/IntWritable org/apache/hadoop/io/Text !org/apache/hadoop/conf/Configured org/apache/hadoop/util/Tool java/lang/Exception java/lang/String java/io/IOException (Ljava/lang/String;)V !org/apache/hadoop/util/ToolRunner Y(Lorg/apache/hadoop/conf/Configuration;Lorg/apache/hadoop/util/Tool;[Ljava/lang/String;)I java/lang/System exit (I)V Ljava/io/PrintStream; java/io/PrintStream println printGenericCommandUsage (Ljava/io/PrintStream;)V append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I "org/apache/hadoop/mapred/JobClient runJob I(Lorg/apache/hadoop/mapred/JobConf;)Lorg/apache/hadoop/mapred/RunningJob; (Ljava/io/Writer;)V write close getConf (()Lorg/apache/hadoop/conf/Configuration; org/apache/hadoop/fs/FileSystem get I(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/FileSystem; copyFromLocalFile :(ZLorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)V :(Lorg/apache/hadoop/conf/Configuration;Ljava/lang/Class;)V set '(Ljava/lang/String;Ljava/lang/String;)V
setJobName setMapperClass (Ljava/lang/Class;)V setReducerClass (org/apache/hadoop/mapred/FileInputFormat
setInputPaths A(Lorg/apache/hadoop/mapred/JobConf;[Lorg/apache/hadoop/fs/Path;)V )org/apache/hadoop/mapred/FileOutputFormat
setOutputPath @(Lorg/apache/hadoop/mapred/JobConf;Lorg/apache/hadoop/fs/Path;)V setNumReduceTasks setOutputKeyClass setMapOutputValueClass setOutputValueClass ! I J N O P O Q R S R T U V [ !* * * Y * * W " Y Z [ \ X ! Y Z [ \ V T Y
Y *
< W a c d X ] ^ _ R ` a b c V 0 W j l n d e V a + S Y + = + - Y + 2 Ӹ * Y+2 *+2 *+2 Y * ** * * * ! "W Y # +2 $ W > t u w ( x L w R z V } d ~ n x X " 4 f R Y Z ] ^ g
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D u v g r ] w x y z { " w x y z { w x y z { 7 w x y z { ` | } ~ V u 7Y* 1 8L+9 Y . * :+; <+ = >+ ? @+ Y* S A+* B+* C+ D E+ F G+ F H+ W 2 + 1 8 ? N V ^ e l s X u Y Z f ` a L ? K = M PEGASUS/classes/pegasus/ConCmptBlock$CombinerStage2.class 0000644 0000000 0000000 00000006430 11443145617 022136 0 ustar root root 2
R S T U T V W
X
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R a
b c
X
d e
Y f
g h i
[ j
k l
m o p q ()V Code LineNumberTable LocalVariableTable this CombinerStage2 InnerClasses %Lpegasus/ConCmptBlock$CombinerStage2; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V ex Ljava/lang/Exception; cur_value_text Lorg/apache/hadoop/io/Text;
cur_ci_string Ljava/lang/String;
cur_nodeid I key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; out_val cur_min_nodeid LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable r o l s t u W ]
Exceptions v Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile ConCmptBlock.java moi s w x y z org/apache/hadoop/io/Text { | r } ~ java/lang/Exception java/lang/StringBuilder Exception! cur_ci_string=[ ] t { ~ org/apache/hadoop/io/IntWritable % & #pegasus/ConCmptBlock$CombinerStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/lang/String java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException hasNext ()Z next ()Ljava/lang/Object; toString ()Ljava/lang/String; substring (I)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; java/io/PrintStream println (Ljava/lang/String;)V charAt (I)C (Lorg/apache/hadoop/io/Text;)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/ConCmptBlock ! / * ! $ % & :6, , : :6 6 $:
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P R S T ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses &Lpegasus/PagerankInitVector$MapStage1; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; line [Ljava/lang/String; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable U
Exceptions V Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PagerankInitVector.java W X # U Y Z [ \ org/apache/hadoop/io/IntWritable ] ^ _ ` org/apache/hadoop/io/Text java/lang/StringBuilder a b c d e f !org/apache/hadoop/io/LongWritable g $pegasus/PagerankInitVector$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String java/io/IOException toString ()Ljava/lang/String;
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)V append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PagerankInitVector ! / * ' S, : :- Y2
Y Y 2
2
+ , - / 1 R 2 H S S ! " S # $ S % & S ' ( M ) * 9 + , - S % . / 0 1 2 3 4A 5 b *+ ,
- ' 4 6 7 8 7 9 & : ( 1 2 3 ; < =
Q PEGASUS/classes/pegasus/ScalarMult$MapStage1Double.class 0000644 0000000 0000000 00000007045 11443145620 021775 0 ustar root root 2
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from_node_int "Lorg/apache/hadoop/io/IntWritable; isYpath Z isXpath s D ()V Code LineNumberTable LocalVariableTable this MapStage1Double InnerClasses $Lpegasus/ScalarMult$MapStage1Double; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; tabpos I out_key out_val LocalVariableTypeTable sLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable ~
Exceptions Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile ScalarMult.java + , org/apache/hadoop/io/IntWritable $ % & ' ( ' ) * java/lang/StringBuilder ScalarMult.MapStage1: s = + #org/apache/hadoop/io/DoubleWritable + !org/apache/hadoop/io/LongWritable org/apache/hadoop/io/Text 8 9 "pegasus/ScalarMult$MapStage1Double &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Double parseDouble (Ljava/lang/String;)D java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V indexOf (Ljava/lang/String;)I substring (II)Ljava/lang/String; java/lang/Integer parseInt charAt (I)C (I)Ljava/lang/String; (I)V (D)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/ScalarMult ! ! " # $ % & ' ( ' ) * + , - P * * Y * * . ) + , - / 0 3 4 5 - f **+
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! 1 PEGASUS/classes/pegasus/NormalizeVector.class 0000644 0000000 0000000 00000006277 11443145620 020155 0 ustar root root 2
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input_path Lorg/apache/hadoop/fs/Path; output_path nreducers I ()V Code LineNumberTable LocalVariableTable this Lpegasus/NormalizeVector; main ([Ljava/lang/String;)V args [Ljava/lang/String; result
Exceptions
printUsage ()I run ([Ljava/lang/String;)I additional_multiplier D fs !Lorg/apache/hadoop/fs/FileSystem; lfs new_args scalar
StackMapTable
SourceFile NormalizeVector.java 6 7 1 2 3 2 4 5 $org/apache/hadoop/conf/Configuration pegasus/NormalizeVector F YNormalizeVector <# of reducers> D E org/apache/hadoop/fs/Path 6 =
-----===[PEGASUS: A Peta-Scale Graph Mining System]===-----
java/lang/StringBuilder +[PEGASUS] Normalizing a vector. input_path= , output_path=
java/lang/String pegasus/L1norm l1norm L1norm = pegasus/ScalarMult smult_output K
[PEGASUS] Normalization completed. The normalized vecotr is saved in HDFS .
!org/apache/hadoop/conf/Configured org/apache/hadoop/util/Tool java/lang/Exception !org/apache/hadoop/util/ToolRunner Y(Lorg/apache/hadoop/conf/Configuration;Lorg/apache/hadoop/util/Tool;[Ljava/lang/String;)I java/lang/System exit (I)V out Ljava/io/PrintStream; java/io/PrintStream println (Ljava/lang/String;)V printGenericCommandUsage (Ljava/io/PrintStream;)V java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/Double parseDouble (Ljava/lang/String;)D append -(Ljava/lang/String;)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; getConf (()Lorg/apache/hadoop/conf/Configuration; org/apache/hadoop/fs/FileSystem get I(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/FileSystem; getLocal N(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/LocalFileSystem; pegasus/PegasusUtils read_l1norm_result )(Lorg/apache/hadoop/conf/Configuration;)D delete (Lorg/apache/hadoop/fs/Path;Z)Z (D)Ljava/lang/StringBuilder; rename 9(Lorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)Z ! / 0 1 2 3 2 4 5 6 7 8 J * * * * 9 ! & ' ( : ; < = > 8 T Y Y * <
9 - / 0 : ? @ A 5 B C D E 8 0
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B C P Q PEGASUS/classes/pegasus/Hadi$MapStage1.class 0000644 0000000 0000000 00000006421 11443145617 017443 0 ustar root root 2
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m o p q make_symmetric I ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses Lpegasus/Hadi$MapStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V
src_nodeid
dst_nodeid key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; line [Ljava/lang/String; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable r =
Exceptions s Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile Hadi.java ! " t u v w x y z { | java/lang/StringBuilder MapStage1: make_symmetric = } ~ } # r b c org/apache/hadoop/io/IntWritable ! org/apache/hadoop/io/Text ! !org/apache/hadoop/io/LongWritable . / pegasus/Hadi$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; (I)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/Hadi ! ! " # 8
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n ' PEGASUS/classes/pegasus/PegasusUtils.class 0000644 0000000 0000000 00000017303 11443145620 017452 0 ustar root root 2Z
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H IdentityPartition InnerClasses RangePartitionS1 RangePartition RedAvgDouble RedSumDoubleLongKey RedSumDoubleTextKey RedSumLongText RedSumDouble RedHistogram RedIdentityGen! RedIdentity"
MapSwapDouble# MapHistogramText$ MapHistogram% MapIdentityDouble& MapIdentityLongText' MapIdentity ()V Code LineNumberTable LocalVariableTable this Lpegasus/PegasusUtils;
open_log_file ,(Ljava/lang/String;)Ljava/io/BufferedWriter;
job_name_base Ljava/lang/String; fstream Ljava/io/FileWriter; out Ljava/io/BufferedWriter;
Exceptions( get_cur_datetime ()Ljava/lang/String; DATE_FORMAT_NOW cal Ljava/util/Calendar; sdf Ljava/text/SimpleDateFormat; format_duration (J)Ljava/lang/String; millis J min2 (II)I a I b
StackMapTable max2 MatvecNaive b(Lorg/apache/hadoop/conf/Configuration;ILjava/lang/String;Ljava/lang/String;Ljava/lang/String;II)V conf &Lorg/apache/hadoop/conf/Configuration; nreducer mat_path vec_path out_path transpose ignore_weights args [Ljava/lang/String; copyToLocalFile _(Lorg/apache/hadoop/conf/Configuration;Lorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)V hdfs_path Lorg/apache/hadoop/fs/Path;
local_path fs !Lorg/apache/hadoop/fs/FileSystem; readLocaldirOneline (Ljava/lang/String;)D in Ljava/io/BufferedReader; e &Ljava/io/UnsupportedEncodingException; Ljava/io/IOException; line new_path output_path str (Ljava/lang/String;I)D partno loadQueryNodeInfo &(Ljava/lang/String;)Ljava/lang/String; tokens i
input_file cur_line query_count query_nodes [J
query_weights [D sum_weights D query_str read_l1norm_result )(Lorg/apache/hadoop/conf/Configuration;)D
l2norm_output lfs local_output_path result
SourceFile PegasusUtils.java m n java/io/FileWriter java/lang/StringBuilder )* .log + m, java/io/BufferedWriter m- yyyy-MM-dd HH:mm:ss. /0 java/text/SimpleDateFormat 12 34 HH:mm:ss GMT5 67 89 java/util/Date m:; z< Running Matvecnaive: mat_path= , vec_path== >, java/lang/String temp_mv )? nosym pegasus/matvec/MatvecNaive@ AB *Done Matvecnaive. Output is saved in HDFS C DE F /part-00000 java/io/BufferedReader java/io/InputStreamReader java/io/FileInputStream UTF8 mG mH I J n $java/io/UnsupportedEncodingException java/io/IOException KLM N
/part-0000 /part-000 /part-00 OPQ RS loadQueryNodeInfo: total queries read. )T )U org/apache/hadoop/fs/Path
l1norm_output VW l1norm l1norm/ XY pegasus/PegasusUtils java/lang/Object &pegasus/PegasusUtils$IdentityPartition %pegasus/PegasusUtils$RangePartitionS1 #pegasus/PegasusUtils$RangePartition !pegasus/PegasusUtils$RedAvgDouble (pegasus/PegasusUtils$RedSumDoubleLongKey (pegasus/PegasusUtils$RedSumDoubleTextKey #pegasus/PegasusUtils$RedSumLongText !pegasus/PegasusUtils$RedSumDouble !pegasus/PegasusUtils$RedHistogram #pegasus/PegasusUtils$RedIdentityGen pegasus/PegasusUtils$RedIdentity "pegasus/PegasusUtils$MapSwapDouble %pegasus/PegasusUtils$MapHistogramText !pegasus/PegasusUtils$MapHistogram &pegasus/PegasusUtils$MapIdentityDouble (pegasus/PegasusUtils$MapIdentityLongText pegasus/PegasusUtils$MapIdentity java/lang/Exception append -(Ljava/lang/String;)Ljava/lang/StringBuilder; toString (Ljava/lang/String;)V (Ljava/io/Writer;)V java/util/Calendar getInstance ()Ljava/util/Calendar; getTime ()Ljava/util/Date; format $(Ljava/util/Date;)Ljava/lang/String; java/util/TimeZone getTimeZone ((Ljava/lang/String;)Ljava/util/TimeZone; setTimeZone (Ljava/util/TimeZone;)V (J)V java/lang/System Ljava/io/PrintStream; java/io/PrintStream println (I)Ljava/lang/StringBuilder; !org/apache/hadoop/util/ToolRunner run Y(Lorg/apache/hadoop/conf/Configuration;Lorg/apache/hadoop/util/Tool;[Ljava/lang/String;)I org/apache/hadoop/fs/FileSystem get I(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/FileSystem; 9(Lorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)V *(Ljava/io/InputStream;Ljava/lang/String;)V (Ljava/io/Reader;)V readLine close split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Double parseDouble length ()I java/lang/Long parseLong (Ljava/lang/String;)J (J)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; getLocal N(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/LocalFileSystem; delete (Lorg/apache/hadoop/fs/Path;Z)Z ! H I m n o 3 * p
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Q S T U ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses !Lpegasus/PagerankBlock$MapStage1; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; line [Ljava/lang/String; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable V ,
Exceptions W Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PagerankBlock.java X Y # V Z [ \ ] org/apache/hadoop/io/IntWritable ^ _ ` a org/apache/hadoop/io/Text b c d e java/lang/StringBuilder f g !org/apache/hadoop/io/LongWritable h pegasus/PagerankBlock$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String java/io/IOException toString ()Ljava/lang/String;
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)V (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V append -(Ljava/lang/String;)Ljava/lang/StringBuilder; pegasus/PagerankBlock ! / * , 6 , : : %- Y2
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R PEGASUS/classes/pegasus/PagerankBlock$PrCounters.class 0000644 0000000 0000000 00000002023 11443145620 021607 0 ustar root root 2 1 #
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PrCounters InnerClasses "Lpegasus/PagerankBlock$PrCounters; $VALUES #[Lpegasus/PagerankBlock$PrCounters; values %()[Lpegasus/PagerankBlock$PrCounters; Code LineNumberTable valueOf 6(Ljava/lang/String;)Lpegasus/PagerankBlock$PrCounters; LocalVariableTable name Ljava/lang/String; (Ljava/lang/String;I)V this Signature ()V 4Ljava/lang/Enum;
SourceFile PagerankBlock.java - . / pegasus/PagerankBlock$PrCounters 0 java/lang/Enum clone ()Ljava/lang/Object; pegasus/PagerankBlock 5(Ljava/lang/Class;Ljava/lang/String;)Ljava/lang/Enum;@1
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& @ PEGASUS/classes/pegasus/SaxpyTextoutput$MapStage1.class 0000644 0000000 0000000 00000007725 11443145620 022032 0 ustar root root 2
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from_node_int "Lorg/apache/hadoop/io/IntWritable; isYpath Z isXpath a D ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses #Lpegasus/SaxpyTextoutput$MapStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; y_path Ljava/lang/String; x_path
input_file
StackMapTable map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text tabpos I out_key out_val LocalVariableTypeTable sLorg/apache/hadoop/mapred/OutputCollector;
Exceptions Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile SaxpyTextoutput.java 3 4 org/apache/hadoop/io/IntWritable , - . / 0 / 1 2 map.input.file java/lang/StringBuilder ,SaxpyTextoutput.MapStage1: map.input.file =
, isYpath=
, isXpath= , a= 3 #org/apache/hadoop/io/DoubleWritable 3 !org/apache/hadoop/io/LongWritable org/apache/hadoop/io/Text F G !pegasus/SaxpyTextoutput$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Double parseDouble (Ljava/lang/String;)D contains (Ljava/lang/CharSequence;)Z java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (Z)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V indexOf (Ljava/lang/String;)I substring (II)Ljava/lang/String; java/lang/Integer parseInt charAt (I)C (I)Ljava/lang/String; (I)V (D)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/SaxpyTextoutput ! ) * + , - . / 0 / 1 2 3 4 5 P * * Y * * 6 ) + , - 7 8 ; < = 5 + M+ N*+
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- block_width I recursive_diagmult ()V Code LineNumberTable LocalVariableTable this RedStage1 InnerClasses Lpegasus/ConCmptBlock$RedStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V block_row line_text Ljava/lang/String; line [Ljava/lang/String; i
tempVectorArr Ljava/util/ArrayList; cur_block
cur_block_row cur_mult_result
output_vector Lorg/apache/hadoop/io/Text; key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; vectorArr blockArr blockRowArr
blockCount blockArrIter blockRowIter LocalVariableTypeTable @Ljava/util/ArrayList;>; ?Ljava/util/ArrayList;>; 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector; VLjava/util/ArrayList;>;>; *Ljava/util/ArrayList; ULjava/util/Iterator;>;>; )Ljava/util/Iterator;
StackMapTable F
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile ConCmptBlock.java 3 4 0 1 2 1 java/lang/StringBuilder RedStage1: block_width= , recursive_diagmult= java/util/ArrayList org/apache/hadoop/io/Text java/lang/Integer msi moi org/apache/hadoop/io/IntWritable 3 @ A pegasus/ConCmptBlock$RedStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/lang/String java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; split '(Ljava/lang/String;)[Ljava/lang/String; substring (I)Ljava/lang/String; pegasus/GIMV parseVectorVal :(Ljava/lang/String;Ljava/lang/Class;)Ljava/util/ArrayList;
parseBlockVal add (Ljava/lang/Object;)Z valueOf (I)Ljava/lang/Integer; size ()I formatVectorElemOutput D(Ljava/lang/String;Ljava/util/ArrayList;)Lorg/apache/hadoop/io/Text; collect '(Ljava/lang/Object;Ljava/lang/Object;)V iterator ()Ljava/util/Iterator; intValue minBlockVector C(Ljava/util/ArrayList;Ljava/util/ArrayList;II)Ljava/util/ArrayList; compareVectors -(Ljava/util/ArrayList;Ljava/util/ArrayList;)I length (I)V pegasus/ConCmptBlock ! - . / 0 1 2 1 3 4 5 / * 6 H 7 8 ; < = 5 C*+ *+ Y
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/ block_width I ()V Code LineNumberTable LocalVariableTable this RedStage1 InnerClasses !Lpegasus/PagerankBlock$RedStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V block_row line_text Ljava/lang/String; line [Ljava/lang/String; elem Lpegasus/VectorElem; cur_mult_result_iter Ljava/util/Iterator; cur_block Ljava/util/ArrayList;
cur_block_row cur_mult_result cur_block_output key "Lorg/apache/hadoop/io/IntWritable; values output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter;
vector_val F
to_nodes_list to_val_list vectorArr blockArr blockRowArr
blockCount self_output Lorg/apache/hadoop/io/Text; blockArrIter blockRowIter LocalVariableTypeTable >Ljava/util/Iterator;>; >Ljava/util/ArrayList;>; ?Ljava/util/ArrayList;>; 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector; *Ljava/util/ArrayList; (Ljava/util/ArrayList; ULjava/util/ArrayList;>;>; TLjava/util/Iterator;>;>; )Ljava/util/Iterator;
StackMapTable G
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile PagerankBlock.java 4 5 2 3 java/lang/StringBuilder RedStage1: block_width= java/util/ArrayList org/apache/hadoop/io/Text java/lang/Double s java/lang/Integer o pegasus/VectorElem org/apache/hadoop/io/IntWritable 4 4 A B pegasus/PagerankBlock$RedStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; split '(Ljava/lang/String;)[Ljava/lang/String; substring (I)Ljava/lang/String; pegasus/GIMV parseVectorVal :(Ljava/lang/String;Ljava/lang/Class;)Ljava/util/ArrayList;
parseBlockVal add (Ljava/lang/Object;)Z valueOf (I)Ljava/lang/Integer; size ()I formatVectorElemOutput D(Ljava/lang/String;Ljava/util/ArrayList;)Lorg/apache/hadoop/io/Text; collect '(Ljava/lang/Object;Ljava/lang/Object;)V iterator ()Ljava/util/Iterator; intValue multBlockVector B(Ljava/util/ArrayList;Ljava/util/ArrayList;I)Ljava/util/ArrayList; row S val -(Ljava/lang/Object;)Ljava/lang/StringBuilder; (I)V pegasus/PagerankBlock ! / 0 1 2 3 4 5 6 / * 7 B 8 9 < = > 6 f **+ Y
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D F G H ()V Code LineNumberTable LocalVariableTable this MapStage2 InnerClasses !Lpegasus/PagerankBlock$MapStage2; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line [Ljava/lang/String; node_key "Lorg/apache/hadoop/io/IntWritable; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
Exceptions I Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PagerankBlock.java J K L M N org/apache/hadoop/io/IntWritable O P Q R org/apache/hadoop/io/Text S T U V !org/apache/hadoop/io/LongWritable W pegasus/PagerankBlock$MapStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/io/IOException toString ()Ljava/lang/String; java/lang/String split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)V (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PagerankBlock !
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p r s t block_width I ()V Code LineNumberTable LocalVariableTable this MapStage4 InnerClasses Lpegasus/ConCmptBlock$MapStage4; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V elem_row component_id key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line [Ljava/lang/String; tokens i block_id LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable r o j u v :
Exceptions w Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile ConCmptBlock.java ! x y z { | } ~ java/lang/StringBuilder MapStage4: block_width = org/apache/hadoop/io/IntWritable org/apache/hadoop/io/Text msf u !org/apache/hadoop/io/LongWritable - . pegasus/ConCmptBlock$MapStage4 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V java/lang/String split '(Ljava/lang/String;)[Ljava/lang/String; substring (I)Ljava/lang/String; (I)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/ConCmptBlock ! ! " / * # % $ % ( ) * " f **+ Y
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cur_value_str Ljava/lang/String; i key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; v1 [D v2 result input_index new_val_str LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable t q w x y 9 z
Exceptions { Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile SaxpyBlock.java | } ~ java/lang/StringBuilder =DotProductBlock:RedStage1 : configure is called. block_width= w org/apache/hadoop/io/Text z x org/apache/hadoop/io/IntWritable + , pegasus/SaxpyBlock$RedStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; pegasus/MatvecUtils decodeBlockVector (Ljava/lang/String;I)[D encodeBlockVector ([DI)Ljava/lang/String; length ()I collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/SaxpyBlock ! 9 * * !
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PrCounters InnerClasses "Lpegasus/PagerankNaive$PrCounters; $VALUES #[Lpegasus/PagerankNaive$PrCounters; values %()[Lpegasus/PagerankNaive$PrCounters; Code LineNumberTable valueOf 6(Ljava/lang/String;)Lpegasus/PagerankNaive$PrCounters; LocalVariableTable name Ljava/lang/String; (Ljava/lang/String;I)V this Signature ()V 4Ljava/lang/Enum;
SourceFile PagerankNaive.java - . / pegasus/PagerankNaive$PrCounters 0 java/lang/Enum clone ()Ljava/lang/Object; pegasus/PagerankNaive 5(Ljava/lang/Class;Ljava/lang/String;)Ljava/lang/Enum;@1
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cur_value_str Ljava/lang/String; diff key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; next_rank
previous_rank LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile PagerankNaive.java 1 2 * + , - . - / - 0 + java/lang/StringBuilder RedStage2: number_nodes =
, mixing_c = , random_coeff = , converge_threshold = org/apache/hadoop/io/Text v 1 org/apache/hadoop/io/IntWritable > ? pegasus/PagerankNaive$RedStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/Double parseDouble (Ljava/lang/String;)D java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V java/util/Iterator hasNext ()Z next ()Ljava/lang/Object; charAt (I)C substring (I)Ljava/lang/String; (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V java/lang/Math abs (D)D pegasus/PagerankNaive$PrCounters
PrCounters CONVERGE_CHECK "Lpegasus/PagerankNaive$PrCounters; !org/apache/hadoop/mapred/Reporter incrCounter (Ljava/lang/Enum;J)V pegasus/PagerankNaive ! ' ( ) * + , - . - / - 0 + 1 2 3 \ * * * * * * 4 5 6 9 : ; 3 x*+ *+
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} EdgeType InnerClasses RedStage5 MapStage5 MapStage4 RedStage3 MapStage3 CombinerStage2 RedStage2 MapStage2 RedStage1 MapStage1 MAX_ITERATIONS I N [F iter_counter edge_path Lorg/apache/hadoop/fs/Path;
curbm_path tempbm_path nextbm_path output_path radius_path radius_summary_path local_output_path Ljava/lang/String; number_nodes nreplication nreducer edge_type Lpegasus/Hadi$EdgeType; encode_bitmask
cur_radius start_from_newbm resume_from_radius make_symmetric ()V Code LineNumberTable LocalVariableTable this Lpegasus/Hadi; main ([Ljava/lang/String;)V args [Ljava/lang/String; result
Exceptions
printUsage ()I run ([Ljava/lang/String;)I fs !Lorg/apache/hadoop/fs/FileSystem; new_path ri Lpegasus/HadiResultInfo; j i
max_iteration eff_diameter_computed Z
StackMapTable gen_bitmask_cmd_file (IILorg/apache/hadoop/fs/Path;)V len start_pos max_filesize "(IIIILorg/apache/hadoop/fs/Path;)V
cur_nodeid threshold count file_name file Ljava/io/FileWriter; out Ljava/io/BufferedWriter;%z{ configStage1 ;(Lpegasus/Hadi$EdgeType;)Lorg/apache/hadoop/mapred/JobConf; edgeType conf "Lorg/apache/hadoop/mapred/JobConf; configStage2 $()Lorg/apache/hadoop/mapred/JobConf; configStage3 configStage4 configStage5
SourceFile Hadi.java $org/apache/hadoop/conf/Configuration pegasus/Hadi hadi <# of vertices> <# of replication> <# of reducers> <'max' or maximum_iteration> org/apache/hadoop/fs/Path hadi_radius hadi_radius_summary enc newbm cont makesym max =
-----===[PEGASUS: A Peta-Scale Graph Mining System]===-----
java/lang/StringBuilder 1[PEGASUS] Computing Radii/Diameter. Current hop:
, edge_path:
, encode: , # reducers: , makesym: , max_iteration:
_temp "Generating initial bitstrings for nodes done 8Resuming from current hadi_curbm which contains up to N( ) / Nh( ): Guessed Radius( *All the bitstrings converged. Finishing... %Calculating the effective diameter... !Summarizing radius information... Reached Max Iteartion Total Iteration = . Neighborhood Summary: Nh( '
[PEGASUS] Radii and diameter computed. [PEGASUS] Maximum diameter: [PEGASUS] Average diameter: "[PEGASUS] 90% Effective diameter: &[PEGASUS] Radii are saved in the HDFS -[PEGASUS] Radii summary is saved in the HDFS bitmask_cmd.hadi. java/io/FileWriter java/io/BufferedWriter # bitmask command file for HADI
# number of nodes in graph = , start_pos= )creating bitmask generation cmd for node ~ c
./ org/apache/hadoop/mapred/JobConf HADI_Stage1 pegasus/Hadi$MapStage1 pegasus/Hadi$RedStage1 org/apache/hadoop/io/IntWritable org/apache/hadoop/io/Text HADI_Stage2 pegasus/Hadi$MapStage2 pegasus/Hadi$RedStage2 pegasus/Hadi$CombinerStage2 HADI_Stage3 pegasus/Hadi$MapStage3 pegasus/Hadi$RedStage3 HADI_Stage4 pegasus/Hadi$MapStage4 HADI_Stage5 pegasus/Hadi$MapStage5 pegasus/Hadi$RedStage5 !org/apache/hadoop/conf/Configured org/apache/hadoop/util/Tool pegasus/Hadi$EdgeType java/lang/Exception org/apache/hadoop/fs/FileSystem java/lang/String pegasus/HadiResultInfo java/io/IOException !org/apache/hadoop/util/ToolRunner Y(Lorg/apache/hadoop/conf/Configuration;Lorg/apache/hadoop/util/Tool;[Ljava/lang/String;)I java/lang/System exit (I)V Ljava/io/PrintStream; java/io/PrintStream println (Ljava/lang/String;)V printGenericCommandUsage (Ljava/io/PrintStream;)V java/lang/Integer parseInt (Ljava/lang/String;)I compareTo
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changed_nodes delete (Lorg/apache/hadoop/fs/Path;)Z rename 9(Lorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)Z average_diameter ([FI)F effective_diameter getName (Ljava/io/Writer;)V write close copyFromLocalFile :(ZLorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)V :(Lorg/apache/hadoop/conf/Configuration;Ljava/lang/Class;)V set '(Ljava/lang/String;Ljava/lang/String;)V
setJobName setMapperClass (Ljava/lang/Class;)V setReducerClass (org/apache/hadoop/mapred/FileInputFormat
setInputPaths A(Lorg/apache/hadoop/mapred/JobConf;[Lorg/apache/hadoop/fs/Path;)V )org/apache/hadoop/mapred/FileOutputFormat
setOutputPath @(Lorg/apache/hadoop/mapred/JobConf;Lorg/apache/hadoop/fs/Path;)V setNumReduceTasks setOutputKeyClass setOutputValueClass setCombinerClass ! P* * * * * * * * * *
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SourceFile HadiBlock.java 5 6 0 1 2 1 3 1 4 1 java/lang/StringBuilder RedStage2: block_width = , nreplication = , encode_bitmask = , cur_radius = java/lang/String org/apache/hadoop/io/Text pegasus/VectorElem u s org/apache/hadoop/io/IntWritable B C pegasus/HadiBlock$RedStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/util/ArrayList java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; pegasus/GIMV parseHADIVector )(Ljava/lang/String;)Ljava/util/ArrayList; iterator ()Ljava/util/Iterator; row S val updateHADIBitString ([JLjava/lang/String;II)[J charAt (I)C parseHADIBitString (Ljava/lang/String;II)[J indexOf (I)I substring (II)Ljava/lang/String; makeHADIBitString 6([[JI[[J[C[Ljava/lang/String;III)Ljava/util/ArrayList; formatVectorElemOutput D(Ljava/lang/String;Ljava/util/ArrayList;)Lorg/apache/hadoop/io/Text; collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/HadiBlock ! - . / 0 1 2 1 3 1 4 1 5 6 7 J * * * * 8 9 : = > ? 7 u*+ *+ *+
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RWRNaive.java org/apache/hadoop/fs/Path rwr_query_norm rwr_vector_difference
rwr_minmax rwr_distr $org/apache/hadoop/conf/Configuration pegasus/RWRNaive uRWRNaive <# of nodes> <# of reducers> java/lang/String java/lang/StringBuilder
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-----===[PEGASUS: A Peta-Scale Graph Mining System]===-----
)[PEGASUS] Computing RWR. Max iteration = , threshold = , cur_iteration= , |V|=
pegasus/NormalizeVector
ITERATION pegasus/L1norm l1norm
difference = 0RWR vector converged. Now preparing to finish... 5Reached the max iteration. Now preparing to finish... #Finding minimum and maximum rwrs... / min =
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[PEGASUS] RWR computed. :[PEGASUS] The final RWR scores are in the HDFS rwr_vector. C[PEGASUS] The minium and maximum scores are in the HDFS rwr_minmax. J[PEGASUS] The histogram of scores in 1000 bins are in the HDFS rwr_distr.
rwr_init_vector.temp java/io/FileWriter java/io/BufferedWriter Creating initial rwr vectors...
v . ./ pegasus/MinMaxInfo /part-00000 java/io/BufferedReader java/io/InputStreamReader java/io/FileInputStream UTF8 0 java/io/IOException org/apache/hadoop/mapred/JobConf
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converged_sum I changed_sum LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
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cur_bm_string Ljava/lang/String; cur_value bitmask_start_index colonPos key "Lorg/apache/hadoop/io/IntWritable; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; bitmask [J self_bitmask bitmask_len out_val bSelfChanged complete_prefix C complete_bitstring saved_self_prefix LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable Y G J
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile Hadi.java 3 4 / 0 1 0 2 0 java/lang/StringBuilder RedStage2: nreplication = , encode_bitmask = , cur_radius = bs org/apache/hadoop/io/Text c 3 org/apache/hadoop/io/IntWritable @ A pegasus/Hadi$RedStage2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V hasNext ()Z next ()Ljava/lang/Object; indexOf (I)I substring (I)Ljava/lang/String; charAt (I)C (II)Ljava/lang/String; pegasus/BitShuffleCoder decode_bitmasks (Ljava/lang/String;I)[I split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Long parseLong (Ljava/lang/String;I)J length ()I pegasus/HadiUtils update_radhistory *([JLjava/lang/String;II)Ljava/lang/String; encode_bitmasks ([JI)Ljava/lang/String; toHexString (J)Ljava/lang/String; collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/Hadi ! , - . / 0 1 0 2 0 3 4 5 J * * * * 6 8 : ; < 7 8 ; < = 5 \*+ *+ *+
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@ B C D ()V Code LineNumberTable LocalVariableTable this MapPass2 InnerClasses Lpegasus/DegDist$MapPass2; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line [Ljava/lang/String; LocalVariableTypeTable pLorg/apache/hadoop/mapred/OutputCollector;
Exceptions E Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile DegDist.java F G H I J org/apache/hadoop/io/IntWritable K L M N O P Q !org/apache/hadoop/io/LongWritable org/apache/hadoop/io/Text R pegasus/DegDist$MapPass2 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/io/IOException toString ()Ljava/lang/String; java/lang/String split '(Ljava/lang/String;)[Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/DegDist !
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A PEGASUS/classes/pegasus/PagerankInitVector$RedStage1.class 0000644 0000000 0000000 00000007226 11443145620 022330 0 ustar root root 2
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from_node_int "Lorg/apache/hadoop/io/IntWritable; ()V Code LineNumberTable LocalVariableTable this RedStage1 InnerClasses &Lpegasus/PagerankInitVector$RedStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; reduce (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V
cur_value_str line [Ljava/lang/String;
start_node end_node i key values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; LocalVariableTypeTable 1Ljava/util/Iterator; iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable d j >
Exceptions Signature (Lorg/apache/hadoop/io/IntWritable;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile PagerankInitVector.java - . % & ' ( org/apache/hadoop/io/IntWritable + , java/lang/String java/lang/StringBuilder - ) * MapStage1: number_nodes = org/apache/hadoop/io/Text v : ; $pegasus/PagerankInitVector$RedStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/util/Iterator (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (D)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; (Ljava/lang/String;)V java/lang/System out Ljava/io/PrintStream; (I)Ljava/lang/StringBuilder; java/io/PrintStream println hasNext ()Z next ()Ljava/lang/Object; split '(Ljava/lang/String;)[Ljava/lang/String; set (I)V collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PagerankInitVector ! " # $ % & ' ( ) * + , - . / P * * * * Y 0 5 7 8 : 1 2 5 6 7 / V*+ ** o *
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" 3 PEGASUS/classes/pegasus/PagerankNaive$MapStage1.class 0000644 0000000 0000000 00000006443 11443145620 021307 0 ustar root root 2
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k m n o make_symmetric I ()V Code LineNumberTable LocalVariableTable this MapStage1 InnerClasses !Lpegasus/PagerankNaive$MapStage1; configure %(Lorg/apache/hadoop/mapred/JobConf;)V job "Lorg/apache/hadoop/mapred/JobConf; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V src_id dst_id key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; line [Ljava/lang/String; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable p <
Exceptions q Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PagerankNaive.java ! r s t u v w x y z java/lang/StringBuilder MapStage1 : make_symmetric = { | { } ~ # p org/apache/hadoop/io/IntWritable org/apache/hadoop/io/Text !org/apache/hadoop/io/LongWritable - . pegasus/PagerankNaive$MapStage1 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/lang/String java/io/IOException org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; charAt (I)C (I)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PagerankNaive ! ! " 8
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MapSwapDouble InnerClasses $Lpegasus/PegasusUtils$MapSwapDouble; map (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V key #Lorg/apache/hadoop/io/LongWritable; value Lorg/apache/hadoop/io/Text; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; line_text Ljava/lang/String; tabpos I out_val LocalVariableTypeTable sLorg/apache/hadoop/mapred/OutputCollector;
Exceptions S Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile PegasusUtils.java T U V W X Y Z [ \ X #org/apache/hadoop/io/DoubleWritable Y ] ^ _ ` a org/apache/hadoop/io/IntWritable b c d e !org/apache/hadoop/io/LongWritable org/apache/hadoop/io/Text f "pegasus/PegasusUtils$MapSwapDouble &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/io/IOException toString ()Ljava/lang/String; java/lang/String indexOf (Ljava/lang/String;)I substring (II)Ljava/lang/String; java/lang/Integer parseInt (I)Ljava/lang/String; java/lang/Double parseDouble (Ljava/lang/String;)D (D)V (I)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/PegasusUtils ! / * ?, : 6 6- Y`
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O PEGASUS/classes/pegasus/HadiBlock.class 0000644 0000000 0000000 00000021621 11443145617 016646 0 ustar root root 2
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_JKLMNOPRTVW MapStage4 InnerClasses RedStage3 MapStage3 CombinerStage2 RedStage2 MapStage2 RedStage1 MapStage1 MAX_ITERATIONS I N [F iter_counter edge_path Lorg/apache/hadoop/fs/Path;
curbm_path tempbm_path nextbm_path output_path radius_path radius_summary_path local_output_path Ljava/lang/String; number_nodes nreplication nreducer encode_bitmask
cur_radius start_from_newbm resume_from_radius block_width ()V Code LineNumberTable LocalVariableTable this Lpegasus/HadiBlock; main ([Ljava/lang/String;)V args [Ljava/lang/String; result
ExceptionsX
printUsage ()I run ([Ljava/lang/String;)I fs !Lorg/apache/hadoop/fs/FileSystem; new_path ri Lpegasus/HadiResultInfo; j i
max_iteration
StackMapTable YZ[ configStage1 $()Lorg/apache/hadoop/mapred/JobConf; conf "Lorg/apache/hadoop/mapred/JobConf; configStage2 configStage3 configStage4 configStage5
SourceFile HadiBlock.java $org/apache/hadoop/conf/Configuration pegasus/HadiBlock\ ]^ _` ab hadiblock <# of nodes> <# of replication> <# of reducers> c de fg org/apache/hadoop/fs/Path eh ij hadi_radius_block hadi_radius_block_summary encZ kj newbm lm max =
-----===[PEGASUS: A Peta-Scale Graph Mining System]===-----
java/lang/StringBuilder D[PEGASUS] Computing Radii/Diameter using block method. Current hop: no np
, edge_path:
, encode: , # reducers: , block width: , max_iteration:
qr _tempblk s tu vwY xyz {| }~ / [ Nh( ): n Guessed Radius( *All the bitstrings converged. Finishing... %Calculating the effective diameter... !Summarizing radius information... Reached Max Iteartion Total Iteration = . Neighborhood Summary: Nh( '
[PEGASUS] Radii and diameter computed. [PEGASUS] Maximum diameter: [PEGASUS] Average diameter: "[PEGASUS] 90% Effective diameter: &[PEGASUS] Radii are saved in the HDFS r -[PEGASUS] Radii summary is saved in the HDFS org/apache/hadoop/mapred/JobConf HADIBlk_Stage1 e pegasus/HadiBlock$MapStage1 pegasus/HadiBlock$RedStage1 ` org/apache/hadoop/io/IntWritable org/apache/hadoop/io/Text HADIBlk_Stage2 pegasus/HadiBlock$MapStage2 pegasus/HadiBlock$RedStage2 pegasus/HadiBlock$CombinerStage2 HADIBlk_Stage3 pegasus/HadiBlock$MapStage3 pegasus/HadiBlock$RedStage3 HADIBlk_Stage4 pegasus/HadiBlock$MapStage4 HADIBlk_Stage5 pegasus/Hadi$MapStage5 MapStage5 pegasus/Hadi$RedStage5 RedStage5 !org/apache/hadoop/conf/Configured org/apache/hadoop/util/Tool java/lang/Exception org/apache/hadoop/fs/FileSystem java/lang/String pegasus/HadiResultInfo !org/apache/hadoop/util/ToolRunner Y(Lorg/apache/hadoop/conf/Configuration;Lorg/apache/hadoop/util/Tool;[Ljava/lang/String;)I java/lang/System exit (I)V out Ljava/io/PrintStream; java/io/PrintStream println (Ljava/lang/String;)V printGenericCommandUsage (Ljava/io/PrintStream;)V java/lang/Integer parseInt (Ljava/lang/String;)I compareTo substring (I)Ljava/lang/String; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; "org/apache/hadoop/mapred/JobClient runJob I(Lorg/apache/hadoop/mapred/JobConf;)Lorg/apache/hadoop/mapred/RunningJob; getConf (()Lorg/apache/hadoop/conf/Configuration; getLocal N(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/LocalFileSystem; org/apache/hadoop/fs/FileUtil fullyDelete ?(Lorg/apache/hadoop/fs/FileSystem;Lorg/apache/hadoop/fs/Path;)V get I(Lorg/apache/hadoop/conf/Configuration;)Lorg/apache/hadoop/fs/FileSystem; copyToLocalFile 9(Lorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)V pegasus/HadiUtils readNhoodOutput ,(Ljava/lang/String;)Lpegasus/HadiResultInfo; nh F (F)Ljava/lang/StringBuilder; converged_nodes
changed_nodes delete (Lorg/apache/hadoop/fs/Path;)Z rename 9(Lorg/apache/hadoop/fs/Path;Lorg/apache/hadoop/fs/Path;)Z average_diameter ([FI)F effective_diameter getName :(Lorg/apache/hadoop/conf/Configuration;Ljava/lang/Class;)V set '(Ljava/lang/String;Ljava/lang/String;)V
setJobName setMapperClass (Ljava/lang/Class;)V setReducerClass (org/apache/hadoop/mapred/FileInputFormat
setInputPaths A(Lorg/apache/hadoop/mapred/JobConf;[Lorg/apache/hadoop/fs/Path;)V )org/apache/hadoop/mapred/FileOutputFormat
setOutputPath @(Lorg/apache/hadoop/mapred/JobConf;Lorg/apache/hadoop/fs/Path;)V setNumReduceTasks setOutputKeyClass setOutputValueClass setCombinerClass pegasus/Hadi !
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change_prefix C LocalVariableTypeTable bLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions O Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile ConCmptBlock.java P Q # R S T U V W X org/apache/hadoop/io/Text Y P Z [ \ P ] ^ _ ` !org/apache/hadoop/io/LongWritable a pegasus/ConCmptBlock$MapStage3 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper java/io/IOException toString ()Ljava/lang/String; java/lang/String
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; charAt (I)C java/lang/Character (C)Ljava/lang/String; (Ljava/lang/String;)V java/lang/Integer (I)Ljava/lang/String; (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/ConCmptBlock ! / * @, , :2 6- Y
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avg_bitpos D converged_count
changed_count bitmask_start_index bitmask_str Ljava/lang/String; LocalVariableTypeTable iLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable I F
Exceptions Signature (Lorg/apache/hadoop/io/LongWritable;Lorg/apache/hadoop/io/Text;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V t(Ljava/lang/Object;Ljava/lang/Object;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Mapper;
SourceFile Hadi.java 6 7 org/apache/hadoop/io/IntWritable 6 / 0 3 4 5 4 java/lang/StringBuilder MapStage3: nreplication = , encode_bitmask= # org/apache/hadoop/io/Text 6 1 2 !org/apache/hadoop/io/LongWritable C D pegasus/Hadi$MapStage3 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Mapper (org/apache/hadoop/mapred/OutputCollector !org/apache/hadoop/mapred/Reporter java/lang/String java/io/IOException (I)V org/apache/hadoop/mapred/JobConf get &(Ljava/lang/String;)Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I java/lang/System out Ljava/io/PrintStream; append -(Ljava/lang/String;)Ljava/lang/StringBuilder; (I)Ljava/lang/StringBuilder; toString ()Ljava/lang/String; java/io/PrintStream println (Ljava/lang/String;)V
startsWith (Ljava/lang/String;)Z split '(Ljava/lang/String;)[Ljava/lang/String; charAt (I)C indexOf (I)I substring (I)Ljava/lang/String; pegasus/BitShuffleCoder decode_bitmasks (Ljava/lang/String;I)[I pegasus/FMBitmask find_least_zero_pos (J)I java/lang/Long parseLong (Ljava/lang/String;I)J java/lang/Math pow (DD)D java/lang/Double (D)Ljava/lang/String; collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/Hadi ! , - . / 0 1 2 3 4 5 4 6 7 8 Q * * Y * * 9 : ; > ? @ 8 C*+ *+
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, < PEGASUS/classes/pegasus/ConCmptBlock$RedStage3.class 0000644 0000000 0000000 00000004562 11443145617 021117 0 ustar root root 2 Y
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C E F G ()V Code LineNumberTable LocalVariableTable this RedStage3 InnerClasses Lpegasus/ConCmptBlock$RedStage3; reduce (Lorg/apache/hadoop/io/Text;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V line Ljava/lang/String; cur_value I key Lorg/apache/hadoop/io/Text; values Ljava/util/Iterator; output *Lorg/apache/hadoop/mapred/OutputCollector; reporter #Lorg/apache/hadoop/mapred/Reporter; sum LocalVariableTypeTable 1Ljava/util/Iterator; bLorg/apache/hadoop/mapred/OutputCollector;
StackMapTable
Exceptions H Signature (Lorg/apache/hadoop/io/Text;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V v(Ljava/lang/Object;Ljava/util/Iterator;Lorg/apache/hadoop/mapred/OutputCollector;Lorg/apache/hadoop/mapred/Reporter;)V x0 Ljava/lang/Object; x1 x2 x3 Lorg/apache/hadoop/mapred/MapReduceBase;Lorg/apache/hadoop/mapred/Reducer;
SourceFile ConCmptBlock.java I J K L M org/apache/hadoop/io/Text N O P Q R N S T U V W X pegasus/ConCmptBlock$RedStage3 &org/apache/hadoop/mapred/MapReduceBase org/apache/hadoop/mapred/Reducer java/io/IOException java/util/Iterator hasNext ()Z next ()Ljava/lang/Object; toString ()Ljava/lang/String; java/lang/Integer parseInt (Ljava/lang/String;)I (I)Ljava/lang/String; (Ljava/lang/String;)V (org/apache/hadoop/mapred/OutputCollector collect '(Ljava/lang/Object;Ljava/lang/Object;)V pegasus/ConCmptBlock !
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D PEGASUS/classes/pegasus/GIMV.class 0000644 0000000 0000000 00000040635 11443145620 015570 0 ustar root root 2
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CDEFGH ()V Code LineNumberTable LocalVariableTable this Lpegasus/GIMV; parseVectorVal :(Ljava/lang/String;Ljava/lang/Class;)Ljava/util/ArrayList; val I D row S strVal Ljava/lang/String; type Ljava/lang/Class; arr Ljava/util/ArrayList; tokens [Ljava/lang/String; i LocalVariableTypeTable Ljava/lang/Class;
StackMapTable _ Signature p(Ljava/lang/String;Ljava/lang/Class;)Ljava/util/ArrayList;>; parseHADIVector )(Ljava/lang/String;)Ljava/util/ArrayList; bitstring S(Ljava/lang/String;)Ljava/util/ArrayList